The Lack of a Centralized and Universal Tool for Input File Generation for Molecular Dynamics Simulations and the Development of such a Tool
This study aims to design and develop a tool that can efficiently generate Molecular Dynamics (MD) simulation input files and systems for various simulation software such as NAMD, Amber and GROMACS collectively using a single platform.Molecular Dynamics simulation is performed in order to understand the structure, dynamics and thermodynamic behavio